Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913513.1_cds_XP_016463554.1_56662
CDS Infomation

[gene=LOC107786570] [db_xref=GeneID:107786570] [protein=sorting nexin 2B-like isoform X3] [protein_id=XP_016463554.1] [location=complement(join(51695..51763,64888..64974,67867..68127,69817..70026,70500..71516))] [gbkey=CDS]
Sequence

ATGATGGGCGAAGAAGGTCGTAAAGAAGCAATGGAGAGTCTATCTCTTGACGACGATGAG
GACGATAACAAATCGACCTCCAAATCCTACTCTAATTACCGAAGTGCCATGACTTCCCTT
TCCGATTCCCACCATCCTCTTTCCCCGTCAGTCGTCGCTACACCTGCCGATTCCGATCCC
TTGTTAGCTCCTCCTGAAACTTCCTCTATTCAACCCCCTTCTCCTTACGCCGACATCGTT
TCCAACCCTCTCGACGCCAGCATTGTTGAAGAACTTAACGGCATCCAAAACCCTAACGAC
GACTCGAGTAACTCGACAATGCCGGAGATACCTCCCTCTTTAAACTTGGAGTATTTGAAT
ATCACGGTTTCAGATCCGCACAAGGAAATGGAATCGGGGTCAATTGTTCCCGGCAGTAAT
ACTTACGTTACCTACTTAATCACTACCAAAACCAATTTACCCGATTACGTAGGATCCGAT
TTCAGCGTTCGGAGACGGTTCAAAGACGTGGTTACGTTATCGGATCGATTGAGCGAAGGT
TACAGAGGGTATTTCATTCCTCCGAGGCCAGATAAGAGTGTAGTGGAGAGTCAAGTGATG
CAAAAGCAAGAGTTCGTGGAGCAGAGAAGATCGGCACTGGAGAAGTACTTGCAGAAGCTT
GCATCACATCCGGTGATCAAGAAGAGTGATGAATTGAGAGTGTTTTTGCAGGTGGACGGT
AAGCTTCCTTTGCCTACGACCACTGATGTGGCATCTAGGGTTTTGGATGGAGCAGTGAAG
TTGCCCAAGCAGTTGTTCGGAGGGGGCTCAGGGGGGAATGTGATTGGCCCGCAGGATGTT
GTGCAACCCGCTAAAGGTGGCAGGGATTTGCTGAGGTTGTTCAAGGAGTTGAAGCAGTCT
GTTGCGAATGATTGGGGCGGCTCGAAGTCACTTGTGGAGGAGGAGGATAAGGATTTCCTG
GAAAAGAAAGAGGGGTTGCAAAATCTTGAGCTGCAACTAAGTAATGCATCAAAACAGGCC
GAATTACTCGTGAAAGCTCAGCAAGATATGGGGGAGACGATTGGAGAACTGGGGCTAACA
TTTATTAAGTTGACGAAATTTGAGAATGAGCGAGCTACGTTGAACTCTCAGAGAGAACGC
GCAGCTGATATGAAAAACGTGGCTACTGCGGCTGTTAAAGCTAGCAGATTGTATCGGGAG
TTGAATTCACAGACAGTGAAGCATTTGGATATTCTACACGAACACCTGAGTTTAATGCTG
GGCATACACCATGCATTTTCAGACCGGTCAAGTGCTTTATTGACAGTGCAGACTCTCATT
TCGGAATTGTCTTCCTTAAATTCAAAAGCAGAGAAACTTGAAACAACAACTTCTAAGATA
TTTGGAGGTGATAAATCAAGAGTTCGAAAGTCGGAAGAGTTAAAAGATGCCATTAGGGTC
ACTGAAGATGCCAAAAGCTGTGCCATCAGAGAATATGAGCGCATTAAGGAGAGTAATCGA
AGTGAGATAGATAGAATAAATAGAGAAAGGCATGTTGACTTTGTGAAGATGTTGAAAGGA
TTCATAACTAATCAGATTCAGACATTGGTACTAGTGAAATCTCGAGAGGTGCTTAGCGGA
TGCCATTTAGACAACTTGAGGTAG

Peptide Sequence

PEP ID

XP_016463554.1
PEP Infomation

PREDICTED: sorting nexin 2B-like isoform X3 [Nicotiana tabacum]
Sequence

MMGEEGRKEAMESLSLDDDEDDNKSTSKSYSNYRSAMTSLSDSHHPLSPSVVATPADSDP
LLAPPETSSIQPPSPYADIVSNPLDASIVEELNGIQNPNDDSSNSTMPEIPPSLNLEYLN
ITVSDPHKEMESGSIVPGSNTYVTYLITTKTNLPDYVGSDFSVRRRFKDVVTLSDRLSEG
YRGYFIPPRPDKSVVESQVMQKQEFVEQRRSALEKYLQKLASHPVIKKSDELRVFLQVDG
KLPLPTTTDVASRVLDGAVKLPKQLFGGGSGGNVIGPQDVVQPAKGGRDLLRLFKELKQS
VANDWGGSKSLVEEEDKDFLEKKEGLQNLELQLSNASKQAELLVKAQQDMGETIGELGLT
FIKLTKFENERATLNSQRERAADMKNVATAAVKASRLYRELNSQTVKHLDILHEHLSLML
GIHHAFSDRSSALLTVQTLISELSSLNSKAEKLETTTSKIFGGDKSRVRKSEELKDAIRV
TEDAKSCAIREYERIKESNRSEIDRINRERHVDFVKMLKGFITNQIQTLVLVKSREVLSG
CHLDNLR

Transcript Sequence

Gene sequence data has not been registered.